Publications

  • A. Budek, K. Kwiatkowski. P. Szymczak, Effect of mobility ratio on interaction between the fingers in unstable growth processes, Phys. Rev. E (in press), 2017 [pdf]
  • P. Kondratiuk, H. Tredak, V. Upadhyay, A.J.C. Ladd, P. Szymczak, Instabilities and finger formation in replacement fronts driven by an oversaturated solution, J. Geophys. Res. Solid Earth, 122, 5972–5991, 2017 [pdf] [movie1] [movie2] [movie3] [movie4]
  • P.J. Zuk, B. Cichocki, P. Szymczak, Intrinsic viscosity of macromolecules within the generalized Rotne-Prager-Yamakawa approximation, J. Fluid. Mech., 822, R2, 2017 [pdf]
  • A.J.C. Ladd, P. Szymczak, Use and misuse of large density asymptotics in the reaction-infiltration instability, Water Resour. Res., 53, 2419–2430, 2017 [pdf]
  • O. Devauchelle, P. Szymczak, M. Pecelerowicz, Y. Cohen. H. Seybold, D. H. Rothman, Laplacian networks: Growth, local symmetry and shape optimization, Phys. Rev. E, 95, 033113, 2017 [pdf]
  • M. Pecelerowicz, P. Szymczak, Stabilizing effect of tip-splitting on the interface motion, Phys. Rev. E, 94, 062801, 2016 [pdf][movie1] [movie2]
  • B. Sandnes, D. Koehn, R. Toussaint, P. Szymczak and E. Aharonov, Editorial: Flow and transformation in porous media, Front. Phys., 4, 42, 2016 [pdf]
  • W. Surmacz-Chwedoruk, V. Babenko, R. Dec, P. Szymczak, W. Dzwolak, The emergence of superstructural order in insulin amyloid fibrils upon multiple rounds of self-seeding, Sci. Rep., 6, 32022, 2016 [pdf]
  • F. Osselin, P. Kondratiuk, A Budek, O. Cybulski, P. Garstecki, P. Szymczak Microfluidic observation of the onset of reactive infiltration instability in an analog fracture, Geophys. Res. Lett., 43, 6907-6915, 2016 [pdf]
  • P. Szymczak, Periodic forces trigger knot untying during translocation of knotted proteins, Sci. Rep., 6, 21702, 2016 [pdf] [movie1] [movie2]
  • A. Hernik-Magoń, W. Pulawski, B. Fedorczyk, D. Tymecka, A. Misicka, P. Szymczak, W. Dzwolak, Beware of cocktails: Chain-length bidispersity triggers explosive self-assembly of poly-L-glutamic acid ß2-fibrils, Biomacromolecules, 17, 1376-82 2016 [pdf]
  • K. Petrus, P. Szymczak, Influence of layering on the formation and growth of solution pipes, Front. Phys., 3, 92, 2016 [pdf]
  • J. Kozak, J. Piasecki, P. Szymczak, Distribution function approach to the stability of fluid phases, Adv. Chem. Phys., 161, 359, 2016 [pdf]
  • Y. Cohen, O. Devauchelle, H. F. Seybold, R. S. Yi, P. Szymczak, D. Rothman, Path selection in the growth of rivers, Proc. Natl. Acad. Sci. USA, 112 , 14132-14137, 2015 [pdf] [press coverage]
  • V. K. Upadhyay, P. Szymczak, A. J. C. Ladd, Initial conditions or emergence; what determines dissolution patterns in rough fractures?, J. Geophys. Res. Solid Earth, 120, 6102-6121, 2015 [pdf] [movie1] [movie2] [movie3] [movie4] [movie5]
  • A. Budek, P. Garstecki, A. Samborski, and P. Szymczak, Thin-finger growth and droplet pinch-off in miscible and immiscible displacements in a periodic network of microfluidic channels, Phys. Fluids., 27, 112109, 2015 [pdf]
  • P. Kondratiuk, P. Szymczak, Steadily translating parabolic dissolution fingers, SIAM J. Appl. Math., 75, 2193-2213, 2015 [pdf]
  • M. Gruziel, P. Szymczak, From ribbons to tubules: a computational study of the polymorphism in aggregation of helical filaments, Soft Matter, 11, 6294-6304, 2015 [pdf] [supplementary] [movie1] [movie2]
  • M. Kot, H. Nagahashi, P. Szymczak, Elastic moduli of simple mass spring models, Vis. Comput., 31, 1339-1350, 2015 [pdf]
  • P. Kondratiuk, H. Tredak, A.J.C. Ladd, P. Szymczak, Synchronization of dissolution and precipitation fronts during infiltration-driven replacement in porous rocks, Geophys. Res. Lett. 44, 2244-2252, 2015 [pdf]
  • M. Pecelerowicz, A. Budek, P. Szymczak, Effective description of the interaction between anisotropic viscous fingers, EPL, 108, 14001, 2014 (Editor's choice) [pdf]
  • P. Szymczak, Translocation of knotted proteins through a pore, Eur. Phys. J. Special Topics, 223, 1805-1812, 2014 [pdf]
  • M. Pecelerowicz, A. Budek, P. Szymczak, Competition between anisotropic viscous fingers, Eur. Phys. J. Special Topics, 223, 1895-1906, 2014 [pdf]
  • M. Wojciechowski, P. Szymczak, M. Carrion-Vazquez, M. Cieplak Protein unfolding by biological unfoldases: insights from modeling, Biophys. J.,107, 1661-1668, 2014 [pdf]
  • K. A. Mizerski, E. Wajnryb, P. J. Zuk, P. Szymczak, The Rotne-Prager-Yamakawa approximation for periodic systems in a shear flow, J. Chem. Phys., 140, 184103, 2014 [pdf]
  • P. Szymczak, A. J. C. Ladd, Reactive-infiltration instabilities in rocks. Part II: Dissolution of a porous matrix., J. Fluid Mech., 738, 591-630, 2014 [pdf]
  • P. J. Zuk, E. Wajnryb, K. A. Mizerski, P. Szymczak, Rotne-Prager-Yamakawa approximation for different-sized particles in application to macromolecular bead models, J. Fluid Mech. 741, R5, 2014 [pdf]
  • J. Piasecki, P. Szymczak, J. Kozak, Communication: Nonexistence of a critical point within the Kirkwood superposition approximation, J. Chem. Phys., 139, 141101, 2013 [pdf]
  • E. Wajnryb, K. A. Mizerski, P. J. Zuk, P. Szymczak, Generalization of the Rotne-Prager-Yamakawa mobility and shear disturbance tensors, J. Fluid Mech., 731, R3, 2013 [pdf]
  • M. Gruziel, W. Dzwolak, P. Szymczak, Chirality inversions in self-assembly of fibrillar superstructures: A computational study, Soft Matter, 9, 8005-8013, 2013 [pdf] [supplementary]
  • P. Szymczak, A. J. C. Ladd, Interacting length scales in the reactive-infiltration instability, Geophys. Res. Lett., 40, 3036-3041, 2013 [pdf] [supplementary]
  • P. Szymczak, Tight knots in proteins: can they block the mitochondrial pores?, Biochem. Soc. Trans., 41, 620-624, 2013 [pdf]
  • D. Thompson, M. Sikora, P. Szymczak, M. Cieplak, A multi-scale molecular dynamics study of the assembly of micron-size supraparticles from 30 nm alkyl-coated nanoparticles, Phys. Chem. Chem. Phys., 15, 8132-8143, 2013 [pdf]
  • J. Piasecki, P. Szymczak, J. Kozak, Stability of phases of a square-well fluid within superposition approximation, J. Chem. Phys., 138, 164506, 2013 [pdf]
  • P. Szymczak, From slots to tubes: the influence of dimensionality on fracture dissolution models, Acta Geophys., 61, 1556-1572, 2013 [pdf]
  • A. Budek, P. Szymczak, Network models of dissolution of porous media, Phys. Rev. E, 86, 056318, 2012 [pdf]
  • P. Szymczak, A. J. C. Ladd, Reactive-infiltration instabilities in rocks. Fracture dissolution., J. Fluid Mech., 702, 239-264, 2012 [pdf]
  • M. Sikora, D. Adam, P. M. Korczyk, A. Prodi-Schwab, P. Szymczak, M. Cieplak, Geometrical and electrical properties of indium tin oxide clusters in ink dispersions, Langmuir, 28, 1523, 2012 [pdf]
  • M. Sikora, P. Szymczak, D. Thompson, M. Cieplak, Linker-mediated assembly of gold nanoparticles into multimeric motifs, Nanotechnology, 22, 445601, 2011 [pdf]
  • J. Piasecki, P. Szymczak, J. Kozak, Structural transitions in hypersphere fluids: predictions of Kirkwood's approximation, J. Chem. Phys., 135, 084509, 2011 [pdf]
  • P. Szymczak, A. J. C. Ladd, Instabilities in the dissolution of a porous matrix, Geophys. Res. Lett., 38, L07403, 2011 [pdf]
  • P. Szymczak, A. J. C. Ladd, The initial stages of cave formation: Beyond the one-dimensional paradigm, Earth Planet. Sci. Lett., 301, 424-432, 2011 [pdf] [movie] [press coverage]
  • P. Szymczak, M. Cieplak, Hydrodynamic effects in proteins (invited review), J. Phys. Cond. Matt., 23, 033102, 2011 [pdf]
  • M. Wojciechowski, P. Szymczak, M. Cieplak, The influence of hydrodynamic interactions on protein dynamics in confined and crowded spaces, Phys. Biol., 7, 046011, 2010
  • J. Piasecki, P. Szymczak, J. Kozak, Prediction of a structural transition in the hard disk fluid, J. Chem. Phys., 133, 164507, 2010 [pdf]
  • J. Sułkowska, P. Sułkowski, P. Szymczak, M. Cieplak, Untying knots in proteins, J. Am. Chem. Soc., 132, 13954-13956, 2010 [pdf] [press coverage]
  • P. Szymczak, H. Janovjak, Periodic forces trigger a complex mechanical response in ubiquitin, J. Mol. Biol., 390, 443, 2009 [pdf] [frontcover]
  • P. Szymczak, A. J. C. Ladd, Wormhole formation in dissolving fractures, J. Geophys. Res., 114, B06203, 2009 [pdf]
  • P. Szymczak, A. J. C. Ladd, Comment on: "From pore scale to wellbore scale: Impact of geometry on wormhole growth in carbonate acidization" by C. E. Cohen et al., Chem. Eng. Sci., 64, 3029, 2009 [pdf]
  • J. Sułkowska, P. Sułkowski, P. Szymczak, M. Cieplak, Stabilizing effect of knots on proteins, Proc. Natl. Acad. Sci. USA, 105, 19714, 2008 [pdf] [press coverage]
  • T. Gubiec, P. Szymczak, Fingered growth in channel geometry: A Loewner equation approach , Phys. Rev. E, 77, 041602, 2008 [pdf]
  • M. L. Ekiel-Jeżewska, T. Gubiec, P. Szymczak, Stokesian dynamics of close particles, Phys. Fluids, 20, 063102, 2008 [pdf] [movie1] [movie2]
  • J. Sułkowska, P. Sułkowski, P. Szymczak, M. Cieplak, Tightening of knots in proteins, Phys. Rev. Lett., 100, 058106, 2008 [pdf] [supplementary material]
  • P. Szymczak, B. Cichocki, Diagrammatic approach to response problems in composite systems, J. Stat. Mech., P01025, 2008 [pdf]
  • P. Szymczak, M. Cieplak, Proteins in a shear flow, J. Chem. Phys. 127, 155106, 2007 [pdf]
  • P. Szymczak, M. Cieplak, Influence of hydrodynamic interactions on mechanical unfolding of proteins, J. Phys. Cond. Matt., 19, 285224, 2007 [pdf]
  • P. Szymczak, M. Cieplak, Stretching of proteins in a uniform flow, J. Chem. Phys., 125, 164903, 2006 [pdf]
  • P. Szymczak, A. J. C. Ladd, A network model of channel competition in fracture dissolution, Geophys. Res. Lett., 33, L05401, 2006 [pdf]
  • M. Cieplak, P. Szymczak, Protein folding in a force clamp, J. Chem. Phys., 124 , 194901, 2006 [pdf]
  • P. Szymczak, M. Cieplak, Stretching of proteins in a force-clamp, J. Phys. Cond. Matt., 18, L21, 2006 [pdf]
  • P. Szymczak, A. J. C. Ladd, Microscopic simulations of fracture dissolution, Geophys. Res. Lett., 31, L23606, 2004 [pdf]
  • N. Lecoq, R. Anthore, B. Cichocki, P. Szymczak, & F. Feuillebois, Drag force on a sphere moving towards a corrugated wall, J. Fluid Mech., 513 , 247, 2004 [pdf]
  • P. Szymczak, B. Cichocki, Memory effects in collective dynamics of Brownian suspensions, J. Chem. Phys., 121, 3329, 2004 [pdf]
  • E. Wajnryb, P. Szymczak, B. Cichocki, Brownian dynamics: divergence of mobility tensor, Physica A, 335, 339, 2004 [pdf]
  • P. Szymczak, A. J. C. Ladd, Stochastic boundary conditions to the convection-diffusion equation including chemical reactions at solid surfaces, Phys. Rev. E, 69, 036704, 2004 [pdf]
  • P. Szymczak, A. J. C. Ladd, Boundary conditions for stochastic solutions of the convection-diffusion equation, Phys. Rev. E, 68, 036704, 2003 [pdf]
  • P. Szymczak, B. Cichocki, Memory function for collective diffusion of interacting Brownian particles, Europhys. Lett., 59, 465, 2002 [pdf]
  • B. Cichocki, M. L. Ekiel-Jezewska, P. Szymczak, E. Wajnryb, Three-particle contribution to sedimentation and collective diffusion in hard-sphere suspensions, J. Chem. Phys., 117, 1231, 2002 [pdf]
  • B. Cichocki, P. Szymczak & F. Feuillebois, Effective boundary conditions for creeping flow along a periodic rough surface, in K. Bajer, H. K. Moffatt eds, Fluid Mechanics and its Applications, vol. 71: Tubes, Sheets and Singularities in Fluid Dynamics, pp. 349-354, Kluwer 2002 [pdf]
  • G. Bocelli, L. Righi, L. Leonyuk, N. Leonyuk, A. Zhilyaeva, G.-J. Babonas, A. Reza, P. Szymczak, M. Baran and B. Sherriff, Structural features and superconductivity of Al-doped Y(RE)-123-type single crystals, Supercond. Sci. Technol., 12, 1150, 1999 [pdf]
  • P. Brydon, P. Szymczak, L. Leonyuk, L. Shvanskaya, Bond-valence analysis of charge distribution in the spin ladders of [M2Cu2O3]m[CuO2]n-type cuprates with m=n=1, Philos. Mag. Lett., 79, 383, 1999 [pdf]
  • P. Szymczak, B. Cichocki, Electrostatic spectrum of renormalized polarizability for nonpolar dielectric, Physica A, 261, 391, 1998 [pdf]
  • P. Szymczak, B. Cichocki, The density of states for Drude-Lorentz model of nonpolar dielectric, Acta Phys. Pol. B, 29, 1795, 1998
  • P. Szymczak, C. D. Graham, M. R. J. Gibbs, High-field magnetization measurements on a ferromagnetic amorphous alloy from 295 to 5 K, IEEE T. Magn., 30, 4788, 1994 [pdf]
 
PhD thesis: Memory function for collective diffusion of interacting Brownian particles, 2001 [pdf]